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MetaFishNet, a fish metabolic network model

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This is a genome-wide reconstruction of fish metabolic model, which was mainly based on

This model serves as a tool to interpret high throughput expression data, as well as a framework for future systems studies.
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This site serves MetaFishNet version 1.9.6. One can download Version 1.10.2, including species specific models, from the Download page. This project is no longer maintained. The metabolic models did support the later development of mummichog, now a popular tool for metabolomics data analysis. We do have continued efforts on the reconstruction of metabolic networks, taking advantage of the emerging mass spectrometry data.